Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs4910897 | chr11:4162477 | A/G | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910898 | chr11:4165117 | A/C | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910899 | chr11:4165349 | G/T | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910900 | chr11:4165366 | T/G | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910901 | chr11:4165390 | G/T | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910902 | chr11:4165391 | A/C | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910903 | chr11:4165488 | C/T | 1.76E-7 | 490 | 19.05 | 14.12 | 16.38 | KM Plot |
| THCA | rs4910905 | chr11:4166224 | T/C | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910906 | chr11:4166323 | T/C | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4910907 | chr11:4168851 | G/A | 1.74E-7 | 490 | 19.05 | 13.9 | 16.38 | KM Plot |
| THCA | rs4917379 | chr10:104752831 | A/T | 5.04E-9 | 490 | 15.2 | 17.73 | 32.1 | KM Plot |
| THCA | rs4917382 | chr10:104838510 | G/A | 5.02E-9 | 490 | 15.23 | 17.68 | 32.1 | KM Plot |
| THCA | rs4917986 | chr10:104630181 | T/C | 2.95E-8 | 486 | 15.63 | 17.53 | 19.1 | KM Plot |
| THCA | rs4917988 | chr10:104752830 | T/G | 5.04E-9 | 490 | 15.2 | 17.73 | 32.1 | KM Plot |
| THCA | rs4918001 | chr10:105013147 | G/T | 1.15E-7 | 490 | 10.17 | 17.83 | 15.3 | KM Plot |